BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B04SP1|AL427115
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1820 0.0
>3x_Contig1769
Length = 25795
Score = 1820 bits (914), Expect = 0.0
Identities = 962/975 (98%), Gaps = 5/975 (0%)
Strand = Plus / Minus
Query: 3 atgatcttgcacacggtcatatgaattattgaacaattgaacacgtctgatctggttcaa 62
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21456 atgatcttg-acacggtcatatgaattattgaacaattgaacacgtctgatctggttcaa 21398
Query: 63 aataggatcattggcatcatccaccatgttgtgagtmacaataggaggtaaagtaccttc 122
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21397 aataggatcattggcatcatccaccatgttgtgagtaacaataggaggtaaagtaccttc 21338
Query: 123 tggtctacgcaatgcaaatacacgttttttcaatacaactttatcacttggtttgaaaag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21337 tggtctacgcaatgcaaatacacgttttttcaatacaactttatcacttggtttgaaaag 21278
Query: 183 ttcgtcaaggctagttggaatttcagttttggtgccattatgaggatatctcatggcgtg 242
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21277 ttcgtcaaggctagttggaatttcagttttggtgccattatgttgatatctcatggcgtg 21218
Query: 243 ttcaaagattctcttaccgatcaattgtgtgacatctttcactgagttttccagttgcct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21217 ttcaaagattctcttaccgatcaattgtgtgacatctttcactgagttttccagttgcct 21158
Query: 303 gaccacagcttggccgcgtas-tcatcgactgtgtatgatttattttttgcgggcatgat 361
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 21157 gaccacagcttggccgcgtagctcatcgactgtgtatgatttatnttttgcgggcatgat 21098
Query: 362 gatgaaggcgacaacagtcattttagatccagatgccttcaatctgtggttcaatcttgc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21097 gatgaaggcgacaacagtcattttagatccagatgccttcaatctgtggttcaatcttgc 21038
Query: 422 caatgattcaatgaacatatcagcacccttgttacggtattcataacgacctgcaatgaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21037 caatgattcaatgaacatatcagcacccttgttacggtattcataacgacctgcaatgaa 20978
Query: 482 gaagtacaaagttttttcaagatcgaaatcgaactgaccatggaaatgacctctgatgaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20977 gaagtacaaagttttttcaagatcgaaatcgaactgaccatggaaatgacctctgatgaa 20918
Query: 542 gtcgttaattttctccttcttcaatgcatgtvaattttggaattcatggacggcttggaa 601
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 20917 gtcgttaattttctccttcttcaatgcatgtaaattttggaattcatggacggcttggaa 20858
Query: 602 tttgatgacatttagcccatttggtaagatcccatcaggtttccgtttcaaaaggtattc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20857 tttgatgacatttagcccatttggtaagatcccatcaggtttccgtttcaaaaggtattc 20798
Query: 662 actttcgtatgcmgtaatctgtgamacagtagtgaaaacgtcagcgctatgagctgccgc 721
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20797 actttcgtatgcagtaatctgtgaaacagtagtgaaaacgtcagcgctatgagctgccgc 20738
Query: 722 acgttcgatacaataacgatgatagataccacgtttgccagcctctgcatccacgtcaaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20737 acgttcgatacaataacgatgatagataccacgtttgccagcctctgcatccacgtcaaa 20678
Query: 782 cttgtcgagattattgtagaaatccacattgccggcacataggtatctacccaacaaagt 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20677 cttgtcgagattattgtagaaatccacattgccggcacataggtatctacccaacaaagt 20618
Query: 842 ggcatgagtagtgaaaattggtgaccacatcaatcctacgttttctgcacaacgggatag 901
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20617 ggcatgagtagtgaaaa-tggtgaccacatcaatcctacgttttctgcacaacgggatag 20559
Query: 902 caacaccagccaaccattcgtggaaatgtg-cacgatggcatttgtctggttcatatggg 960
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 20558 caacaccagccaaccattcgtggaaatgtgccacgatggcatttgtctggttcatatggg 20499
Query: 961 cc-attcaccaagga 974
|| ||||||||||||
Sbjct: 20498 ccaattcaccaagga 20484
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6882
Number of Sequences: 1807
Number of extensions: 6882
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)